Sequence Similarity Clusters for the Entities in PDB 1YPN

Entity #1 | Chains: A
HYDROXYMETHYLBILANE SYNTHASE protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56872
95 % 5 5 14363 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 5 5 14137
70 % 5 6 11269
50 % 5 6 10116
40 % 10 16 3022
30 % 10 16 2835

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures