Sequence Similarity Clusters for the Entities in PDB 1YPJ

Entity #1 | Chains: L
Thrombin light chain protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 107 323 40
95 % 107 324 58
90 % 107 324 61
70 % 107 326 69
50 % 107 326 93
40 % 107 326 117
30 % 107 326 130
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 94 278 51
95 % 111 362 20
90 % 111 369 23
70 % 111 393 27
50 % 111 393 57
40 % 689 1585 4
30 % 732 1727 6
Entity #3 | Chains: I
Hirudin protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.