Sequence Similarity Clusters for the Entities in PDB 1YPG

Entity #1 | Chains: L
Thrombin light chain protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 102 328 43
95 % 102 329 58
90 % 102 329 63
70 % 102 331 72
50 % 102 331 97
40 % 102 331 120
30 % 102 331 134
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 89 283 52
95 % 106 367 34
90 % 106 374 36
70 % 106 398 41
50 % 106 398 74
40 % 675 1611 4
30 % 714 1753 6
Entity #3 | Chains: I
Hirudin protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.