Sequence Similarity Clusters for the Entities in PDB 1YPG

Entity #1 | Chains: L
Thrombin light chain protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 101 325 40
95 % 101 326 57
90 % 101 326 61
70 % 101 328 68
50 % 101 328 93
40 % 101 328 117
30 % 101 328 130
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 88 280 51
95 % 105 364 20
90 % 105 371 23
70 % 105 395 27
50 % 105 395 57
40 % 662 1587 4
30 % 701 1729 6
Entity #3 | Chains: I
Hirudin protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.