Sequence Similarity Clusters for the Entities in PDB 1YPE

Entity #1 | Chains: L
Thrombin light chain protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 95 323 39
95 % 95 324 55
90 % 95 324 59
70 % 95 326 67
50 % 95 326 92
40 % 95 326 116
30 % 95 326 130
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 84 278 50
95 % 99 362 19
90 % 99 369 22
70 % 99 393 26
50 % 99 393 47
40 % 623 1579 3
30 % 656 1720 6
Entity #3 | Chains: I
Hirudin protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.