Sequence Similarity Clusters for the Entities in PDB 1YPE

Entity #1 | Chains: L
Thrombin light chain protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 93 321 40
95 % 93 322 55
90 % 93 322 59
70 % 93 324 68
50 % 93 324 92
40 % 93 324 114
30 % 93 324 128
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 83 277 50
95 % 97 360 19
90 % 97 367 21
70 % 97 391 26
50 % 97 391 45
40 % 615 1567 3
30 % 648 1707 6
Entity #3 | Chains: I
Hirudin protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.