Sequence Similarity Clusters for the Entities in PDB 1YPE

Entity #1 | Chains: L
Thrombin light chain protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 97 329 44
95 % 97 330 60
90 % 97 330 65
70 % 97 332 76
50 % 97 332 100
40 % 97 332 124
30 % 97 332 136
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 86 284 55
95 % 101 368 37
90 % 101 375 38
70 % 101 399 44
50 % 101 399 77
40 % 641 1618 4
30 % 674 1760 6
Entity #3 | Chains: I
Hirudin protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.