Sequence Similarity Clusters for the Entities in PDB 1YM4

Entity #1 | Chains: A,B,C
Beta-secretase 1 protein, length: 408 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 214 263 8
95 % 289 345 12
90 % 289 345 14
70 % 289 345 23
50 % 299 357 24
40 % 299 357 34
30 % 299 357 53
Entity #2 | Chains: X,Y,Z
NVP-AMK640 INHIBITOR protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.