Sequence Similarity Clusters for the Entities in PDB 1YM4

Entity #1 | Chains: A,B,C
Beta-secretase 1 protein, length: 408 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 219 270 18
95 % 294 352 12
90 % 294 352 13
70 % 294 352 22
50 % 304 364 32
40 % 304 364 44
30 % 304 364 62
Entity #2 | Chains: X,Y,Z
NVP-AMK640 INHIBITOR protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.