Sequence Similarity Clusters for the Entities in PDB 1YM2

Entity #1 | Chains: A,B,C
Beta-secretase 1 protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 139 246 9
95 % 194 324 12
90 % 194 324 13
70 % 194 324 22
50 % 199 336 24
40 % 199 336 34
30 % 199 336 51
Entity #2 | Chains: X,Y,Z
NVP-AUR200 INHIBITOR protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.