Sequence Similarity Clusters for the Entities in PDB 1YEX

Entity #1 | Chains: A,B,C,D,E
Alkyl hydroperoxide reductase subunit C protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16115
95 % 7 21 261 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 0.7
PDBFlex
90 % 7 21 276
70 % 7 21 321
50 % 7 23 341
40 % 25 76 85
30 % 58 123 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures