Sequence Similarity Clusters for the Entities in PDB 1YEX

Entity #1 | Chains: A,B,C,D,E
Alkyl hydroperoxide reductase subunit C protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 14877
95 % 8 22 238 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 0.7
PDBFlex
90 % 8 22 252
70 % 8 22 284
50 % 8 23 295
40 % 25 74 67
30 % 58 121 46

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.