Sequence Similarity Clusters for the Entities in PDB 1YCS

Entity #1 | Chains: A
P53 protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 24 508
95 % 69 82 164
90 % 70 83 171
70 % 76 91 181
50 % 77 106 164
40 % 77 106 180
30 % 77 106 192
Entity #2 | Chains: B
53BP2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59681
95 % 1 2 10577
90 % 1 2 10445
70 % 1 2 9935
50 % 2 3 8005
40 % 2 3 7359
30 % 2 3 6488

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures