Sequence Similarity Clusters for the Entities in PDB 1YCI

Entity #1 | Chains: A
Hypoxia-inducible factor 1 alpha inhibitor protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 31 1370
95 % 34 38 1431 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 34 38 1458
70 % 34 38 1461
50 % 34 38 1514
40 % 34 38 1526
30 % 34 38 1499

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures