Sequence Similarity Clusters for the Entities in PDB 1YCI

Entity #1 | Chains: A
Hypoxia-inducible factor 1 alpha inhibitor protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 31 1334
95 % 34 38 1393 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 34 38 1415
70 % 34 38 1430
50 % 34 38 1486
40 % 34 38 1498
30 % 34 38 1473

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.