Sequence Similarity Clusters for the Entities in PDB 1Y5U

Entity #1 | Chains: T
Trypsin, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 21070
95 % 153 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 153 448 34
70 % 168 532 19
50 % 176 683 14
40 % 324 1698 4
30 % 336 1848 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures