Sequence Similarity Clusters for the Entities in PDB 1Y3Y

Entity #1 | Chains: A
Trypsin, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 250 427 44
95 % 270 473 32 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 270 473 35
70 % 297 561 20
50 % 313 713 15
40 % 589 1900 4
30 % 589 1914 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures