Sequence Similarity Clusters for the Entities in PDB 1Y3Y

Entity #1 | Chains: A
Trypsin, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 243 412 39
95 % 269 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 269 471 20
70 % 296 557 19
50 % 312 708 14
40 % 580 1864 4
30 % 581 1886 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures