Sequence Similarity Clusters for the Entities in PDB 1Y3Y

Entity #1 | Chains: A
Trypsin, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 252 433 26
95 % 272 479 28 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 272 479 31
70 % 300 569 18
50 % 316 721 14
40 % 600 1933 4
30 % 600 1947 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures