Sequence Similarity Clusters for the Entities in PDB 1Y3W

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 288 412 39
95 % 321 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 321 471 20
70 % 360 557 19
50 % 389 708 14
40 % 735 1864 4
30 % 739 1886 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures