Sequence Similarity Clusters for the Entities in PDB 1XN3

Entity #1 | Chains: A,B,C,D
Beta-secretase 1 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 138 278 21
95 % 192 361 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 192 361 16
70 % 192 361 24
50 % 195 373 40
40 % 195 373 51
30 % 195 373 71
Entity #2 | Chains: I
Peptidic inhibitor protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures