Sequence Similarity Clusters for the Entities in PDB 1XN3

Entity #1 | Chains: A,B,C,D
Beta-secretase 1 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 134 274 20
95 % 188 357 14 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 188 357 16
70 % 188 357 24
50 % 191 369 39
40 % 191 369 50
30 % 191 369 67
Entity #2 | Chains: I
Peptidic inhibitor protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.