Sequence Similarity Clusters for the Entities in PDB 1XN2

Entity #1 | Chains: A,B,C,D
Beta-secretase 1 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 278 20
95 % 150 361 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 150 361 16
70 % 150 361 24
50 % 152 373 39
40 % 152 373 51
30 % 152 373 69
Entity #2 | Chains: E,F,G,H
OM03-4 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures