Sequence Similarity Clusters for the Entities in PDB 1XN2

Entity #1 | Chains: A,B,C,D
Beta-secretase 1 protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 275 25
95 % 151 363 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 151 363 16
70 % 151 363 24
50 % 153 375 41
40 % 153 375 56
30 % 153 375 73
Entity #2 | Chains: E,F,G,H
OM03-4 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures