Sequence Similarity Clusters for the Entities in PDB 1XI4

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
Clathrin heavy chain protein, length: 1630 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 1562
95 % 2 3 2075
90 % 2 3 2128
70 % 2 3 2124
50 % 2 3 2097
40 % 2 3 2089
30 % 2 3 2005
Entity #2 | Chains: J,K,L,M,N,O,P,Q,R
Clathrin light chain A protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 2840
95 % 2 2 3541
90 % 2 2 3591
70 % 2 2 3534
50 % 2 2 3446
40 % 2 2 3332
30 % 2 2 3109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.