Sequence Similarity Clusters for the Entities in PDB 1XI4

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
Clathrin heavy chain protein, length: 1630 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 1649
95 % 2 3 2181
90 % 2 3 2233
70 % 2 3 2225
50 % 2 3 2205
40 % 2 3 2201
30 % 2 3 2098
Entity #2 | Chains: J,K,L,M,N,O,P,Q,R
Clathrin light chain A protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 3004
95 % 2 2 3705
90 % 2 2 3756
70 % 2 2 3697
50 % 2 2 3589
40 % 2 2 3458
30 % 2 2 3234

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures