Sequence Similarity Clusters for the Entities in PDB 1XGQ

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 3550
95 % 16 22 1840
90 % 19 26 1384
70 % 559 1519 3
50 % 1371 3677 1
40 % 1372 3678 1
30 % 1521 4338 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52132
95 % 9 11 4880
90 % 10 12 4289
70 % 666 1782 1
50 % 1372 3677 1
40 % 1373 3678 1
30 % 1522 4338 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 477 562 3
95 % 528 615 4
90 % 540 632 5
70 % 746 847 6
50 % 751 856 6
40 % 773 890 10
30 % 773 890 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.