Sequence Similarity Clusters for the Entities in PDB 1XGQ

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 4087
95 % 18 25 1799
90 % 22 33 1251
70 % 665 1803 2
50 % 1656 4435 1
40 % 1656 4435 1
30 % 1858 5225 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58506
95 % 9 11 5517
90 % 10 12 4872
70 % 799 2145 1
50 % 1657 4435 1
40 % 1657 4435 1
30 % 1859 5225 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 543 633 3
95 % 594 686 4
90 % 606 703 5
70 % 812 919 6
50 % 817 927 6
40 % 839 961 11
30 % 839 961 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.