Sequence Similarity Clusters for the Entities in PDB 1XGP

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 4245
95 % 15 25 1862
90 % 18 33 1298
70 % 718 2280 1
50 % 1473 4619 1
40 % 1473 4619 1
30 % 1653 5440 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60242
95 % 6 11 5729
90 % 7 12 5054
70 % 711 2238 2
50 % 1474 4619 1
40 % 1474 4619 1
30 % 1654 5440 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 538 650 3
95 % 589 703 4
90 % 601 720 5
70 % 808 937 7
50 % 813 945 7
40 % 835 979 11
30 % 835 979 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.