Sequence Similarity Clusters for the Entities in PDB 1XGP

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 3707
95 % 13 22 1906
90 % 15 26 1439
70 % 509 1609 3
50 % 1262 3902 1
40 % 1263 3903 1
30 % 1407 4631 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53956
95 % 6 11 5043
90 % 7 12 4442
70 % 614 1894 1
50 % 1263 3902 1
40 % 1264 3903 1
30 % 1408 4631 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 475 577 3
95 % 526 630 4
90 % 538 647 5
70 % 744 862 6
50 % 749 871 6
40 % 771 905 10
30 % 771 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.