Sequence Similarity Clusters for the Entities in PDB 1XGP

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 3550
95 % 13 22 1840
90 % 15 26 1384
70 % 476 1519 3
50 % 1184 3677 1
40 % 1185 3678 1
30 % 1312 4338 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52131
95 % 6 11 4880
90 % 7 12 4289
70 % 575 1782 1
50 % 1185 3677 1
40 % 1186 3678 1
30 % 1313 4338 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 462 562 3
95 % 513 615 4
90 % 525 632 5
70 % 731 847 6
50 % 736 856 6
40 % 758 890 10
30 % 758 890 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.