Sequence Similarity Clusters for the Entities in PDB 1XGP

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 3958
95 % 15 25 1727
90 % 17 32 1255
70 % 546 1729 2
50 % 1366 4220 1
40 % 1366 4221 1
30 % 1515 4972 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56781
95 % 6 11 5328
90 % 7 12 4716
70 % 658 2041 1
50 % 1367 4220 1
40 % 1367 4221 1
30 % 1516 4972 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 511 618 3
95 % 562 671 4
90 % 574 688 5
70 % 780 904 6
50 % 785 912 6
40 % 807 946 10
30 % 807 946 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.