Sequence Similarity Clusters for the Entities in PDB 1XGP

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 3732
95 % 13 22 1918
90 % 15 26 1447
70 % 510 1617 3
50 % 1269 3934 1
40 % 1270 3935 1
30 % 1414 4663 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54338
95 % 6 11 5079
90 % 7 12 4475
70 % 617 1909 1
50 % 1270 3934 1
40 % 1271 3935 1
30 % 1415 4663 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 477 580 3
95 % 528 633 4
90 % 540 650 5
70 % 746 865 6
50 % 751 874 6
40 % 773 908 10
30 % 773 908 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.