Sequence Similarity Clusters for the Entities in PDB 1XGP

Entity #1 | Chains: A
antibody kappa light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 3917
95 % 15 25 1707
90 % 17 29 1334
70 % 544 1710 2
50 % 1354 4166 1
40 % 1354 4167 1
30 % 1501 4915 1
Entity #2 | Chains: B
antibody kappa heavy chain protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56239
95 % 6 11 5286
90 % 7 12 4668
70 % 653 2016 1
50 % 1355 4166 1
40 % 1355 4167 1
30 % 1502 4915 1
Entity #3 | Chains: C
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 506 613 3
95 % 557 666 4
90 % 569 683 5
70 % 775 899 6
50 % 780 907 6
40 % 802 941 10
30 % 802 941 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.