Sequence Similarity Clusters for the Entities in PDB 1XFP

Entity #1 | Chains: A
heavy chain antibody protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64114
95 % 1 5 9429 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 6 7697
70 % 36 350 9
50 % 42 540 8
40 % 60 887 5
30 % 69 1013 7
Entity #2 | Chains: L
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 176 646 3
95 % 178 699 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 182 716 5
70 % 198 933 7
50 % 198 941 7
40 % 200 975 11
30 % 200 975 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.