Sequence Similarity Clusters for the Entities in PDB 1XFP

Entity #1 | Chains: A
heavy chain antibody protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66451
95 % 1 5 9757 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 6 7986
70 % 38 386 9
50 % 45 583 7
40 % 63 936 5
30 % 73 1065 7
Entity #2 | Chains: L
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 179 665 3
95 % 181 718 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 185 735 5
70 % 203 955 7
50 % 203 963 8
40 % 205 997 11
30 % 205 997 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures