Sequence Similarity Clusters for the Entities in PDB 1XDA

Entity #1 | Chains: A,C,E,G
FATTY ACID ACYLATED INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 290 6
95 % 101 296 9 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 101 298 10
70 % 102 304 12
50 % 102 304 17
40 % 102 304 30
30 % 102 304 50
Entity #2 | Chains: B,D,F,H
FATTY ACID ACYLATED INSULIN protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 95 266 7
95 % 103 303 7 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 103 303 9
70 % 103 306 13
50 % 103 306 18
40 % 103 306 31
30 % 103 306 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures