Sequence Similarity Clusters for the Entities in PDB 1XDA

Entity #1 | Chains: A,C,E,G
FATTY ACID ACYLATED INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 102 295 7
95 % 102 301 10 Flexibility: Low
Max RMSD: 6.8, Avg RMSD: 1.0
PDBFlex
90 % 102 303 11
70 % 103 309 13
50 % 103 309 19
40 % 103 309 32
30 % 103 309 53
Entity #2 | Chains: B,D,F,H
FATTY ACID ACYLATED INSULIN protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 96 271 8
95 % 104 308 9 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 104 308 10
70 % 104 311 14
50 % 104 311 21
40 % 104 311 35
30 % 104 311 57

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures