Sequence Similarity Clusters for the Entities in PDB 1XDA

Entity #1 | Chains: A,C,E,G
FATTY ACID ACYLATED INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 101 291 6
95 % 101 297 9 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 101 299 10
70 % 102 305 12
50 % 102 305 17
40 % 102 305 31
30 % 102 305 49
Entity #2 | Chains: B,D,F,H
FATTY ACID ACYLATED INSULIN protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 95 267 7
95 % 103 304 8 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 103 304 9
70 % 103 307 13
50 % 103 307 18
40 % 103 307 32
30 % 103 307 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures