Sequence Similarity Clusters for the Entities in PDB 1WYK

Entity #1 | Chains: A,B,C,D
SINDBIS VIRUS CAPSID PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4503
95 % 2 11 3417 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 2 11 3466
70 % 5 15 2682
50 % 5 23 1142
40 % 5 23 1152
30 % 5 23 1138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures