Sequence Similarity Clusters for the Entities in PDB 1WM0

Entity #1 | Chains: X
Peroxisome proliferator activated receptor gamma protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 127 115
95 % 172 198 106 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.6
PDBFlex
90 % 172 198 114
70 % 135 158 158
50 % 186 218 121
40 % 186 218 142
30 % 564 634 16
Entity #2 | Chains: Y
14-mer from Nuclear receptor coactivator 2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures