Sequence Similarity Clusters for the Entities in PDB 1WM0

Entity #1 | Chains: X
Peroxisome proliferator activated receptor gamma protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 129 115
95 % 176 204 105 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.6
PDBFlex
90 % 176 204 109
70 % 138 163 153
50 % 189 223 119
40 % 189 223 139
30 % 567 639 16
Entity #2 | Chains: Y
14-mer from Nuclear receptor coactivator 2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures