Sequence Similarity Clusters for the Entities in PDB 1WM0

Entity #1 | Chains: X
Peroxisome proliferator activated receptor gamma protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 139 161 91
95 % 146 169 117 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 146 169 121
70 % 146 169 136
50 % 194 226 104
40 % 194 226 128
30 % 874 1019 10
Entity #2 | Chains: Y
14-mer from Nuclear receptor coactivator 2 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures