Sequence Similarity Clusters for the Entities in PDB 1W98

Entity #1 | Chains: A
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 227 367 41
95 % 234 386 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 234 386 39
70 % 234 386 51
50 % 244 436 71
40 % 247 470 60
30 % 1856 4494 2
Entity #2 | Chains: B
G1/S-SPECIFIC CYCLIN E1 protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40276
95 % 1 2 34041 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 32542
70 % 1 2 29004
50 % 1 2 24787
40 % 1 2 21818
30 % 1 2 18222

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures