Sequence Similarity Clusters for the Entities in PDB 1W98

Entity #1 | Chains: A
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 222 365 23
95 % 228 380 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 228 380 37
70 % 228 380 44
50 % 237 405 66
40 % 241 462 49
30 % 1574 3941 2
Entity #2 | Chains: B
G1/S-SPECIFIC CYCLIN E1 protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36907
95 % 1 2 28963 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 27957
70 % 1 2 25234
50 % 1 2 21653
40 % 1 2 19117
30 % 1 2 16272

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures