Sequence Similarity Clusters for the Entities in PDB 1W1W

Entity #1 | Chains: A,B,C,D
STRUCTURAL MAINTENANCE OF CHROMOSOME 1 protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17683
95 % 1 1 16106 Flexibility: Medium
Max RMSD: 11.7, Avg RMSD: 6.0
PDBFlex
90 % 1 1 15797
70 % 1 1 14761
50 % 1 1 13017
40 % 1 1 11767
30 % 2 4 5606
Entity #2 | Chains: E,F,G,H
SISTER CHROMATID COHESION PROTEIN 1 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23494
95 % 1 1 20116 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 19570
70 % 1 1 17992
50 % 1 1 15627
40 % 1 1 13920
30 % 1 1 11913

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.