Sequence Similarity Clusters for the Entities in PDB 1VYW

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 290 356 19
95 % 301 371 28
90 % 301 371 30
70 % 301 371 39
50 % 316 395 50
40 % 330 451 31
30 % 2279 3503 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 265 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 84 118
95 % 54 103 139
90 % 58 107 145
70 % 58 107 165
50 % 58 107 193
40 % 58 107 211
30 % 60 112 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.