Sequence Similarity Clusters for the Entities in PDB 1VYW

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 290 355 8
95 % 301 370 14
90 % 301 370 15
70 % 301 370 25
50 % 315 393 39
40 % 327 444 31
30 % 2187 3361 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 265 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 84 107
95 % 54 103 137
90 % 58 107 142
70 % 58 107 163
50 % 58 107 186
40 % 58 107 204
30 % 60 112 210

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.