Sequence Similarity Clusters for the Entities in PDB 1VFB

Entity #1 | Chains: A
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 12186
95 % 4 17 3334
90 % 4 19 2954
70 % 27 168 74
50 % 46 272 22
40 % 134 769 5
30 % 149 882 8
Entity #2 | Chains: B
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 5007
95 % 4 17 3331
90 % 4 17 3382
70 % 4 32 1222
50 % 83 452 8
40 % 135 769 5
30 % 150 882 8
Entity #3 | Chains: C
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 293 580 3
95 % 330 633 4
90 % 337 650 5
70 % 492 865 6
50 % 492 874 6
40 % 496 908 10
30 % 496 908 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.