Sequence Similarity Clusters for the Entities in PDB 1VFB

Entity #1 | Chains: A
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 12935
95 % 4 17 3563
90 % 4 19 3154
70 % 27 182 70
50 % 47 293 21
40 % 142 840 5
30 % 158 966 7
Entity #2 | Chains: B
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 5361
95 % 4 17 3558
90 % 4 17 3599
70 % 4 32 1313
50 % 90 502 8
40 % 143 840 5
30 % 159 966 7
Entity #3 | Chains: C
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 329 625 3
95 % 366 678 4
90 % 373 695 5
70 % 528 911 6
50 % 528 919 6
40 % 532 953 10
30 % 532 953 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.