Sequence Similarity Clusters for the Entities in PDB 1VFB

Entity #1 | Chains: A
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 12114
95 % 4 17 3321
90 % 4 19 2942
70 % 27 167 73
50 % 46 269 22
40 % 131 758 5
30 % 146 870 8
Entity #2 | Chains: B
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 4987
95 % 4 17 3317
90 % 4 17 3370
70 % 4 31 1229
50 % 82 447 9
40 % 132 758 5
30 % 147 870 8
Entity #3 | Chains: C
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 291 577 3
95 % 328 630 4
90 % 335 647 5
70 % 490 862 6
50 % 490 871 6
40 % 494 905 10
30 % 494 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.