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An Information Portal to 105906 Biological Macromolecular Structures

BOUND WATER MOLECULES AND CONFORMATIONAL STABILIZATION HELP MEDIATE AN ANTIGEN-ANTIBODY ASSOCIATION
Sequence Clustering and Redundancy Reduction Results
1VFB
Sequence Clusters for the Sequence Entities in PDB 1VFB
Entity #1: Chains: A - IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 6 10407
95% 4 17 2844
90% 4 17 2887
70% 22 148 67
50% 37 223 31
40% 108 609 8
30% 123 720 8
Entity #2: Chains: B - IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 11 4262
95% 4 17 2840
90% 4 17 2883
70% 4 30 1125
50% 68 344 12
40% 109 609 8
30% 124 720 8
Entity #3: Chains: C - HEN EGG WHITE LYSOZYME protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 247 496 3
95% 280 545 4
90% 287 562 4
70% 442 777 6
50% 442 786 6
40% 446 820 9
30% 446 820 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.