Sequence Similarity Clusters for the Entities in PDB 1VFB

Entity #1 | Chains: A
IGG1-KAPPA D1.3 FV (LIGHT CHAIN) protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 13136
95 % 4 17 3615
90 % 4 21 2865
70 % 27 183 74
50 % 47 294 22
40 % 143 848 5
30 % 159 974 7
Entity #2 | Chains: B
IGG1-KAPPA D1.3 FV (HEAVY CHAIN) protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 5494
95 % 4 17 3610
90 % 4 17 3654
70 % 4 32 1333
50 % 91 509 8
40 % 144 848 5
30 % 160 974 7
Entity #3 | Chains: C
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 333 631 3
95 % 370 684 4
90 % 377 701 5
70 % 532 917 6
50 % 532 925 6
40 % 536 959 11
30 % 536 959 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.