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Crystal Structure of Cytochrome b6f Complex from M.laminosus
Sequence Clustering and Redundancy Reduction Results
1VF5
Sequence Clusters for the Sequence Entities in PDB 1VF5
Entity #1: Chains: A,N - CYTOCHROME B6 protein, length: 215 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 9 4376
95% 11 12 3659
90% 11 12 3687
70% 12 13 3427
50% 12 13 3361
40% 12 13 3223
30% 12 13 2982
Entity #2: Chains: B,O - SUBUNIT IV protein, length: 160 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17553
95% 8 9 5042
90% 11 12 3732
70% 12 13 3449
50% 12 13 3384
40% 12 13 3247
30% 12 13 3004
Entity #3: Chains: C,P - CYTOCHROME F protein, length: 289 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 9 4334
95% 8 9 4952
90% 8 9 4961
70% 10 11 3903
50% 11 12 3530
40% 11 12 3384
30% 11 12 3134
Entity #4: Chains: D,Q - RIESKE IRON-SULFUR PROTEIN protein, length: 179 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 17216
95% 8 9 5027
90% 8 9 5041
70% 11 12 3693
50% 11 12 3602
40% 11 12 3441
30% 11 12 3177
Entity #5: Chains: E,R - PROTEIN PET L protein, length: 32 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 9 4481
95% 8 9 5124
90% 8 9 5132
70% 8 9 5032
50% 8 9 4752
40% 8 9 4449
30% 8 9 4041
Entity #6: Chains: F,S - PROTEIN PET M protein, length: 35 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 9 4479
95% 8 9 5122
90% 8 9 5130
70% 11 12 3799
50% 11 12 3692
40% 11 12 3528
30% 11 12 3257
Entity #7: Chains: G,T - PROTEIN PET G protein, length: 37 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 9 4477
95% 8 9 5119
90% 8 9 5128
70% 11 12 3798
50% 11 12 3691
40% 11 12 3527
30% 11 12 3256
Entity #8: Chains: H,U - PROTEIN PET N protein, length: 29 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 9 4482
95% 8 9 5126
90% 8 9 5134
70% 11 12 3803
50% 11 12 3696
40% 11 12 3532
30% 11 12 3261
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.