Sequence Similarity Clusters for the Entities in PDB 1VCB

Entity #1 | Chains: A,D,G,J
PROTEIN (ELONGIN B) protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 18 808
95 % 13 20 1056
90 % 13 20 1078
70 % 13 20 1120
50 % 13 20 1167
40 % 13 20 1185
30 % 13 20 1160
Entity #2 | Chains: B,E,H,K
PROTEIN (ELONGIN C) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 21061
95 % 1 1 18073
90 % 1 1 17590
70 % 1 1 16265
50 % 1 1 14202
40 % 1 1 12691
30 % 1 1 10877
Entity #3 | Chains: C,F,I,L
PROTEIN (VHL) protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 24 263
95 % 21 24 385
90 % 21 24 408
70 % 21 24 449
50 % 21 24 516
40 % 21 24 554
30 % 21 24 556

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.