Sequence Similarity Clusters for the Entities in PDB 1VCB

Entity #1 | Chains: A,D,G,J
PROTEIN (ELONGIN B) protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 18 875
95 % 13 20 1120
90 % 13 20 1147
70 % 13 20 1185
50 % 13 20 1236
40 % 13 20 1248
30 % 13 20 1222
Entity #2 | Chains: B,E,H,K
PROTEIN (ELONGIN C) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22223
95 % 1 1 19014
90 % 1 1 18510
70 % 1 1 17084
50 % 1 1 14897
40 % 1 1 13284
30 % 1 1 11376
Entity #3 | Chains: C,F,I,L
PROTEIN (VHL) protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 26 265
95 % 23 26 380
90 % 23 26 408
70 % 23 26 449
50 % 23 26 525
40 % 23 26 564
30 % 23 26 558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.