Sequence Similarity Clusters for the Entities in PDB 1VCB

Entity #1 | Chains: A,D,G,J
PROTEIN (ELONGIN B) protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 18 915
95 % 13 20 1171
90 % 13 20 1198
70 % 13 20 1232
50 % 13 20 1287
40 % 13 20 1303
30 % 13 20 1277
Entity #2 | Chains: B,E,H,K
PROTEIN (ELONGIN C) protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23368
95 % 1 1 20015
90 % 1 1 19464
70 % 1 1 17881
50 % 1 1 15542
40 % 1 1 13854
30 % 1 1 11843
Entity #3 | Chains: C,F,I,L
PROTEIN (VHL) protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 35 211
95 % 31 35 293
90 % 31 35 303
70 % 31 35 351
50 % 31 35 415
40 % 31 35 441
30 % 31 35 441

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.