Sequence Similarity Clusters for the Entities in PDB 1URC

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 291 364 20
95 % 302 379 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 302 379 34
70 % 302 379 42
50 % 318 404 55
40 % 331 460 41
30 % 2435 3751 2
Entity #2 | Chains: B,D
CYCLIN A2 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 86 159
95 % 53 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 57 109 152
70 % 57 109 173
50 % 57 109 204
40 % 57 109 227
30 % 60 115 224
Entity #3 | Chains: E,F
PEPTIDE INHIBITOR protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.