Sequence Similarity Clusters for the Entities in PDB 1UKI

Entity #1 | Chains: A
mitogen-activated protein kinase 8 isoform 4 protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10160
95 % 19 31 1198 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 60 79 418
70 % 63 82 429
50 % 416 469 53
40 % 420 476 60
30 % 3230 3879 2
Entity #2 | Chains: B
11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.