Sequence Similarity Clusters for the Entities in PDB 1UKI

Entity #1 | Chains: A
mitogen-activated protein kinase 8 isoform 4 protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10954
95 % 19 32 1195 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 60 80 479
70 % 63 83 467
50 % 421 476 66
40 % 426 484 84
30 % 3568 4300 2
Entity #2 | Chains: B
11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures