Sequence Similarity Clusters for the Entities in PDB 1UKH

Entity #1 | Chains: A
Mitogen-activated protein kinase 8 isoform 4 protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 10586
95 % 9 32 1165 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 38 80 469
70 % 41 83 462
50 % 346 475 62
40 % 348 482 77
30 % 2808 4073 2
Entity #2 | Chains: B
11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures