Sequence Similarity Clusters for the Entities in PDB 1UKH

Entity #1 | Chains: A
Mitogen-activated protein kinase 8 isoform 4 protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 10997
95 % 9 32 1220 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 38 80 481
70 % 41 83 468
50 % 362 492 54
40 % 364 500 60
30 % 2970 4330 2
Entity #2 | Chains: B
11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures