Sequence Similarity Clusters for the Entities in PDB 1UJK

Entity #1 | Chains: A,B
ADP-ribosylation factor binding protein GGA1 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 2772
95 % 2 10 3098 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 2 10 3154
70 % 2 10 3095
50 % 2 14 1732
40 % 2 14 1726
30 % 2 14 1696
Entity #2 | Chains: C,D
C-terminal peptide from Beta-secretase protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures