Sequence Similarity Clusters for the Entities in PDB 1TWC

Entity #1 | Chains: A
DNA-directed RNA polymerase II largest subunit protein, length: 1733 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 109 206
95 % 40 109 294
90 % 40 109 306
70 % 40 109 328
50 % 40 111 338
40 % 40 111 373
30 % 40 111 377
Entity #10 | Chains: L
DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 117 178
95 % 44 117 251
90 % 44 117 260
70 % 44 117 292
50 % 44 117 319
40 % 44 117 346
30 % 44 117 353
Entity #2 | Chains: B
DNA-directed RNA polymerase II 140 kDa polypeptide protein, length: 1224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 110 203
95 % 40 111 287
90 % 40 111 300
70 % 40 111 321
50 % 40 113 335
40 % 40 121 321
30 % 40 124 328
Entity #3 | Chains: C
DNA-directed RNA polymerase II 45 kDa polypeptide protein, length: 318 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 108 208
95 % 40 108 296
90 % 40 108 310
70 % 40 108 331
50 % 40 109 350
40 % 40 109 381
30 % 40 109 383
Entity #4 | Chains: E
DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 120 159
95 % 45 120 225
90 % 45 120 236
70 % 45 120 271
50 % 45 121 302
40 % 45 122 320
30 % 45 122 335
Entity #5 | Chains: F
DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 116 182
95 % 44 116 254
90 % 44 116 263
70 % 44 116 296
50 % 44 119 307
40 % 44 119 333
30 % 44 119 342
Entity #6 | Chains: H
DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 43 119 161
95 % 44 120 227
90 % 44 120 238
70 % 44 120 273
50 % 44 120 308
40 % 44 120 334
30 % 44 123 332
Entity #7 | Chains: I
DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 110 205
95 % 40 110 293
90 % 40 110 305
70 % 40 110 327
50 % 40 111 341
40 % 40 111 376
30 % 40 114 370
Entity #8 | Chains: J
DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 119 163
95 % 44 119 232
90 % 44 119 242
70 % 44 121 266
50 % 44 129 265
40 % 44 129 289
30 % 44 129 305
Entity #9 | Chains: K
DNA-directed RNA polymerase II 13.6 kDa polypeptide protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 111 201
95 % 40 111 290
90 % 40 111 302
70 % 40 111 323
50 % 40 111 348
40 % 40 112 372
30 % 40 112 375

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.