Sequence Similarity Clusters for the Entities in PDB 1TVR

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 27 1196
95 % 234 257 110
90 % 234 257 114
70 % 234 257 128
50 % 235 258 156
40 % 236 259 167
30 % 236 259 177
Entity #2 | Chains: B
REVERSE TRANSCRIPTASE protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 94 107 208
95 % 228 251 118 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 228 251 122
70 % 228 251 137
50 % 230 253 164
40 % 230 253 175
30 % 230 253 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures