Sequence Similarity Clusters for the Entities in PDB 1TVR

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 26 1200
95 % 230 252 92
90 % 230 252 97
70 % 230 252 114
50 % 231 253 152
40 % 232 254 165
30 % 232 254 179
Entity #2 | Chains: B
REVERSE TRANSCRIPTASE protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 93 105 206
95 % 224 246 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 224 246 120
70 % 224 246 136
50 % 226 248 159
40 % 226 248 176
30 % 226 248 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures