Sequence Similarity Clusters for the Entities in PDB 1TUB

Entity #1 | Chains: A
TUBULIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 51 380
95 % 181 181 71
90 % 182 182 74
70 % 190 190 88
50 % 190 190 117
40 % 377 378 25
30 % 387 388 43
Entity #2 | Chains: B
TUBULIN protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 77 77 183
95 % 177 177 72
90 % 182 182 71
70 % 188 188 87
50 % 188 188 116
40 % 378 378 25
30 % 388 388 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures