Sequence Similarity Clusters for the Entities in PDB 1TUB

Entity #1 | Chains: A
TUBULIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 51 369
95 % 173 173 74
90 % 174 174 79
70 % 182 182 90
50 % 182 182 120
40 % 361 362 27
30 % 371 372 42
Entity #2 | Chains: B
TUBULIN protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 77 77 183
95 % 169 169 77
90 % 174 174 77
70 % 180 180 89
50 % 180 180 119
40 % 362 362 27
30 % 372 372 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures