Sequence Similarity Clusters for the Entities in PDB 1TT1

Entity #1 | Chains: A,B
Glutamate receptor, ionotropic kainate 2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 3102
95 % 22 30 704 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.7
PDBFlex
90 % 22 31 653
70 % 49 86 242
50 % 152 276 37
40 % 152 277 48
30 % 166 293 56

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures