Sequence Similarity Clusters for the Entities in PDB 1TS6

Entity #1 | Chains: A
Photoactive yellow protein protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 62 685
95 % 31 67 758 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 31 67 783
70 % 31 67 834
50 % 31 67 882
40 % 31 68 856
30 % 31 68 858

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NWZ 1 A Photoactive yellow protein 1053
2 3PYP 1 A PHOTOACTIVE YELLOW PROTEIN THIOESTER LINKAGE BETWEEN THE SULFUR OF CYS 69 AND CARBOXY GROUP OF THE 4-HYDROXY CINNAMIC ACID CHROMOPHORE 1053
3 1OT6 1 A Photoactive yellow protein 1053
4 1OT9 1 A Photoactive yellow protein 1053
5 2QJ7 1 A Photoactive yellow protein 1053
6 1OTB 1 A Photoactive yellow protein 1053
7 1F9I 1 A PHOTOACTIVE YELLOW PROTEIN 1053
8 1OTA 1 A Photoactive yellow protein 1053
9 1F98 1 A PHOTOACTIVE YELLOW PROTEIN 1053
10 1UWN 1 X PHOTOACTIVE YELLOW PROTEIN DARK STATE, GROUND STATE (PG) 1053
11 1KOU 1 A PHOTOACTIVE YELLOW PROTEIN 1053
12 1UWP 1 X PHOTOACTIVE YELLOW PROTEIN LIGHT STATE 1053
13 2ZOH 1 A Photoactive yellow protein 1053
14 1UGU 1 A PHOTOACTIVE YELLOW PROTEIN 1053
15 2QJ5 1 A Photoactive yellow protein 1053
16 1OTD 1 A, B Photoactive yellow protein 1053
17 2D01 1 A Photoactive yellow protein 1053
18 1OTI 1 A Photoactive yellow protein 1053
19 1D7E 1 A PHOTOACTIVE YELLOW PROTEIN 1053
20 1S1Z 1 A Photoactive Yellow Protein 1053
21 2D02 1 A Photoactive yellow protein 1053
22 1S1Y 1 A Photoactive yellow protein 1053
23 1OTE 1 A photoactive yellow protein, PYP 1053
24 2PHY 1 A PHOTOACTIVE YELLOW PROTEIN 1053
25 1TS0 1 A Photoactive yellow protein 1053
26 1T1C 1 A Photoactive yellow protein 1053
27 4I3I 1 A Photoactive yellow protein 1053
28 5HD3 1 A Photoactive yellow protein 1053
29 4BBU 1 A PHOTOACTIVE YELLOW PROTEIN 1053
30 4BBT 1 A PHOTOACTIVE YELLOW PROTEIN 1053
31 1TS6 1 A Photoactive yellow protein 1053
32 5HDS 1 A Photoactive yellow protein 1053
33 4WL9 1 A Photoactive yellow protein 1053
34 1T19 1 A Photoactive yellow protein 1053
35 5HDD 1 A Photoactive yellow protein 1053
36 5HDC 1 A Photoactive yellow protein 1053
37 3VE4 1 A Photoactive yellow protein 1053
38 3UME 1 A Photoactive yellow protein 1053
39 4WLA 1 A Photoactive yellow protein 1053
40 4B9O 1 A PHOTOACTIVE YELLOW PROTEIN 1053
41 1T18 1 A Photoactive yellow protein 1053
42 4I38 1 A Photoactive yellow protein 1053
43 3VE3 1 A Photoactive yellow protein 1053
44 4HY8 1 A Photoactive yellow protein 1053
45 1GSV 1 A PHOTOACTIVE YELLOW PROTEIN 1053
46 4BBV 1 A PHOTOACTIVE YELLOW PROTEIN 1053
47 1GSX 1 A PHOTOACTIVE YELLOW PROTEIN 1053
48 3UMD 1 A Photoactive yellow protein 1053
49 4I3J 1 A Photoactive yellow protein 1053
50 1GSW 1 A PHOTOACTIVE YELLOW PROTEIN 1053
51 5HD5 1 A Photoactive yellow protein 1053
52 4I3A 1 A Photoactive yellow protein 1053
53 2PYP 1 A PHOTOACTIVE YELLOW PROTEIN 1053
54 4I39 1 A Photoactive yellow protein 1053
55 1T1A 1 A Photoactive yellow protein 1053
56 1T1B 1 A Photoactive yellow protein 1053
57 1S4R 1 A Photoactive yellow protein 1053
58 1S4S 1 A Photoactive yellow protein 1053
59 1TS8 1 A Photoactive yellow protein 1053
60 1TS7 1 A Photoactive yellow protein 1053
61 1MZU 1 A, B, C PPR N-terminal domain 34018
62 2I9V 1 A Photoactive yellow protein 1053
63 2QWS 1 A Photoactive yellow protein 1053
64 5GX9 1 A Photoactive yellow protein 1053
65 2KX6 1 A Photoactive yellow protein 1053
66 2ZOI 1 A Photoactive yellow protein 1053
67 2PYR 1 A PHOTOACTIVE YELLOW PROTEIN THIOESTER LINK BETWEEN SG CYS 69 AND C1 HC4 150 1053
68 3PHY 1 A PHOTOACTIVE YELLOW PROTEIN 1053