Sequence Similarity Clusters for the Entities in PDB 1TKZ

Entity #1 | Chains: A
Pol polyprotein, Reverse transcriptase, Chain A protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 60 367
95 % 88 218 106
90 % 88 218 111
70 % 88 218 126
50 % 89 219 152
40 % 89 219 166
30 % 89 219 183
Entity #2 | Chains: B
Pol polyprotein, Reverse transcriptase, Chain B protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 56 461
95 % 84 212 113
90 % 84 212 117
70 % 84 212 135
50 % 85 213 164
40 % 85 213 174
30 % 85 213 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.