Sequence Similarity Clusters for the Entities in PDB 1TKX

Entity #1 | Chains: A
Pol polyprotein, Reverse transcriptase, Chain A protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 61 368
95 % 113 224 104
90 % 113 224 109
70 % 113 224 123
50 % 114 225 150
40 % 114 225 168
30 % 114 225 183
Entity #2 | Chains: B
Pol polyprotein, Reverse transcriptase, Chain B protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 57 501
95 % 109 218 109
90 % 109 218 114
70 % 109 218 131
50 % 110 219 156
40 % 110 219 173
30 % 110 219 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.