Sequence Similarity Clusters for the Entities in PDB 1TKX

Entity #1 | Chains: A
Pol polyprotein, Reverse transcriptase, Chain A protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 60 367
95 % 112 218 104
90 % 112 218 109
70 % 112 218 125
50 % 113 219 151
40 % 113 219 165
30 % 113 219 183
Entity #2 | Chains: B
Pol polyprotein, Reverse transcriptase, Chain B protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 56 458
95 % 108 212 111
90 % 108 212 115
70 % 108 212 133
50 % 109 213 163
40 % 109 213 174
30 % 109 213 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.