Sequence Similarity Clusters for the Entities in PDB 1TKT

Entity #1 | Chains: A
Pol polyproteins [Reverse transcriptase], Chain A protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 61 478
95 % 64 236 104
90 % 64 236 108
70 % 64 236 123
50 % 65 237 149
40 % 65 237 166
30 % 65 237 183
Entity #2 | Chains: B
Pol polyproteins [Reverse transcriptase], Chain B protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 57 612
95 % 60 230 111
90 % 60 230 116
70 % 60 230 136
50 % 61 231 160
40 % 61 231 177
30 % 61 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.