Sequence Similarity Clusters for the Entities in PDB 1TKT

Entity #1 | Chains: A
Pol polyproteins [Reverse transcriptase], Chain A protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 61 375
95 % 60 228 104
90 % 60 228 108
70 % 60 228 123
50 % 61 229 150
40 % 61 229 167
30 % 61 229 183
Entity #2 | Chains: B
Pol polyproteins [Reverse transcriptase], Chain B protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 57 523
95 % 56 222 112
90 % 56 222 117
70 % 56 222 133
50 % 57 223 159
40 % 57 223 174
30 % 57 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.