POP-OUT | CLOSE

An Information Portal to 107049 Biological Macromolecular Structures

Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 17mer epitope
Sequence Clustering and Redundancy Reduction Results
1TJI
Sequence Clusters for the Sequence Entities in PDB 1TJI
Entity #1: Chains: L - anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 7 7939
95% 5 41 979
90% 101 380 5
70% 378 1339 3
50% 925 3188 1
40% 926 3189 1
30% 1023 3771 1
Entity #2: Chains: H - anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 15838
95% 5 41 978
90% 5 41 996
70% 449 1537 2
50% 926 3188 1
40% 927 3189 1
30% 1024 3771 1
Entity #3: Chains: P - Envelope Glycoprotein GP41 protein, length: 18 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.