Sequence Similarity Clusters for the Entities in PDB 1TJI

Entity #1 | Chains: L
anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9101
95 % 5 41 1121
90 % 134 502 3
70 % 462 1611 3
50 % 1147 3908 1
40 % 1148 3909 1
30 % 1278 4637 1
Entity #2 | Chains: H
anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 18008
95 % 5 41 1118
90 % 5 41 1138
70 % 557 1896 1
50 % 1148 3908 1
40 % 1149 3909 1
30 % 1279 4637 1
Entity #3 | Chains: P
Envelope Glycoprotein GP41 protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.