Sequence Similarity Clusters for the Entities in PDB 1TJH

Entity #1 | Chains: L
anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 9256
95 % 3 41 1146
90 % 133 518 3
70 % 459 1639 3
50 % 1141 3985 1
40 % 1142 3986 1
30 % 1263 4715 1
Entity #2 | Chains: H
anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 18278
95 % 3 41 1144
90 % 3 41 1166
70 % 553 1932 1
50 % 1142 3985 1
40 % 1143 3986 1
30 % 1264 4715 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1TJG 2 H FAB 2F5 Heavy Chain 9606
2 1TJH 2 H anti-HIV-1 antibody 2F5 Heavy Chain 9606
3 1TJI 2 H anti-HIV-1 antibody 2F5 Heavy Chain 9606
4 3LEV 3 H 2F5 ANTIBODY HEAVY CHAIN 9606