Sequence Similarity Clusters for the Entities in PDB 1TJH

Entity #1 | Chains: L
anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 10652
95 % 3 41 1307
90 % 207 746 3
70 % 672 2392 1
50 % 1378 4843 1
40 % 1378 4843 1
30 % 1541 5705 1
Entity #2 | Chains: H
anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20978
95 % 3 41 1304
90 % 3 41 1331
70 % 664 2342 2
50 % 1379 4843 1
40 % 1379 4843 1
30 % 1542 5705 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1TJG 2 H FAB 2F5 Heavy Chain 9606
2 1TJH 2 H anti-HIV-1 antibody 2F5 Heavy Chain 9606
3 1TJI 2 H anti-HIV-1 antibody 2F5 Heavy Chain 9606
4 3LEV 3 H 2F5 ANTIBODY HEAVY CHAIN 9606