Sequence Similarity Clusters for the Entities in PDB 1TJH

Entity #1 | Chains: L
anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 9146
95 % 3 41 1131
90 % 129 503 3
70 % 448 1617 3
50 % 1115 3934 1
40 % 1116 3935 1
30 % 1236 4663 1
Entity #2 | Chains: H
anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 18103
95 % 3 41 1128
90 % 3 41 1148
70 % 542 1909 1
50 % 1116 3934 1
40 % 1117 3935 1
30 % 1237 4663 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1TJG 2 H FAB 2F5 Heavy Chain 9606
2 1TJH 2 H anti-HIV-1 antibody 2F5 Heavy Chain 9606
3 1TJI 2 H anti-HIV-1 antibody 2F5 Heavy Chain 9606
4 3LEV 3 H 2F5 ANTIBODY HEAVY CHAIN 9606