Sequence Similarity Clusters for the Entities in PDB 1TJH

Entity #1 | Chains: L
anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 9184
95 % 3 41 1133
90 % 130 505 3
70 % 450 1620 3
50 % 1119 3940 1
40 % 1120 3941 1
30 % 1240 4669 1
Entity #2 | Chains: H
anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 18148
95 % 3 41 1130
90 % 3 41 1150
70 % 544 1912 1
50 % 1120 3940 1
40 % 1121 3941 1
30 % 1241 4669 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3IDG 1 A 2F5 Fab light chain 9606
2 1TJG 1 L FAB 2F5 Light Chain 9606
3 1TJH 1 L anti-HIV-1 antibody 2F5 Light Chain 9606
4 3DRQ 1 A 2F5 Fab' light chain 9606
5 1TJI 1 L anti-HIV-1 antibody 2F5 Light Chain 9606
6 3D0V 1 A 2F5 Fab heavy chain 9606
7 3MOD 2 L ANTI-HIV-1 ANTIBODY 2F5 LIGHT CHAIN 9606
8 2F5B 1 L PROTEIN (ANTIBODY 2F5 (LIGHT CHAIN)) FAB' 9606
9 1U8I 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
10 3IDI 1 A 2F5 Fab light chain 9606
11 1U8H 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
12 2F5A 1 L PROTEIN (ANTIBODY 2F5 (LIGHT CHAIN)) FAB' 9606
13 3MOA 2 L ANTI-HIV-1 ANTIBODY 2F5 LIGHT CHAIN 9606
14 2PR4 1 L nmAb 2F5 Fab' Heavy Chain 9606
15 1U95 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
16 1U8K 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
17 3IDN 1 A 2F5 Fab light chain 9606
18 1U92 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
19 1U91 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
20 1U8Q 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
21 3IDJ 1 A 2F5 Fab light chain 9606
22 3IDM 1 A 2F5 Fab light chain 9606
23 1U8J 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
24 3D0L 1 A 2F5 heavy chain 9606
25 2P8L 1 A nmAb 2F5, light chain 9606
26 1U8M 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
27 3LEV 2 L 2F5 ANTIBODY LIGHT CHAIN 9606
28 3MOB 2 L ANTI-HIV-1 ANTIBODY 2F5 LIGHT CHAIN 9606
29 1U8N 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
30 1U93 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
31 2PW2 1 A 2F5 Fab' heavy chain 9606
32 2PW1 1 A 2F5 Fab fragment heavy chain 9606
33 1U8L 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
34 2P8M 1 A nmAb 2F5, light chain 9606
35 2P8P 1 A nmAb 2F5, light chain 9606
36 1U8O 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
37 3DRT 1 A 2F5 Fab' light chain 9606
38 1U8P 1 A ANTIBODY 2F5 (LIGHT CHAIN) 9606
39 3BQU 1 A 2F5 Fab' light chain 9606
40 3EGS 1 A 2F5 Fab' light chain 9606
41 3DRO 1 A 2F5 Fab light chain 9606