Sequence Similarity Clusters for the Entities in PDB 1TJH

Entity #1 | Chains: L
anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 7 9101
95 % 3 41 1121
90 % 129 502 3
70 % 447 1611 3
50 % 1109 3908 1
40 % 1110 3909 1
30 % 1230 4637 1
Entity #2 | Chains: H
anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 18008
95 % 3 41 1118
90 % 3 41 1138
70 % 539 1896 1
50 % 1110 3908 1
40 % 1111 3909 1
30 % 1231 4637 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.