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Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 11mer epitope
Sequence Clustering and Redundancy Reduction Results
1TJH
Sequence Clusters for the Sequence Entities in PDB 1TJH
Entity #1: Chains: L - anti-HIV-1 antibody 2F5 Light Chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 8028
95% 3 41 993
90% 102 389 5
70% 373 1358 3
50% 913 3236 1
40% 914 3237 1
30% 1003 3821 1
Entity #2: Chains: H - anti-HIV-1 antibody 2F5 Heavy Chain protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 15990
95% 3 41 992
90% 3 41 1012
70% 444 1561 2
50% 914 3236 1
40% 915 3237 1
30% 1004 3821 1
Entity #3: Chains: P - Envelope glycoprotein GP41 protein, length: 13 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.