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Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 7mer epitope
Sequence Clustering and Redundancy Reduction Results
1TJG
Sequence Clusters for the Sequence Entities in PDB 1TJG
Entity #1: Chains: L - FAB 2F5 Light Chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 7645
95% 2 41 890
90% 75 368 4
70% 278 1297 3
50% 685 3090 1
40% 686 3091 1
30% 749 3653 1
Entity #2: Chains: H - FAB 2F5 Heavy Chain protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 4 15285
95% 2 41 888
90% 2 41 913
70% 333 1490 2
50% 686 3090 1
40% 687 3091 1
30% 750 3653 1
Entity #3: Chains: P - Envelope glycoprotein GP41 protein, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.