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Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 7mer epitope
Sequence Clustering and Redundancy Reduction Results
1TJG
Sequence Clusters for the Sequence Entities in PDB 1TJG
Entity #1: Chains: L - FAB 2F5 Light Chain protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 7 7829
95% 2 41 967
90% 76 377 5
70% 285 1332 3
50% 699 3170 1
40% 700 3171 1
30% 765 3753 1
Entity #2: Chains: H - FAB 2F5 Heavy Chain protein, length: 237 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 4 15657
95% 2 41 966
90% 2 41 986
70% 340 1528 2
50% 700 3170 1
40% 701 3171 1
30% 766 3753 1
Entity #3: Chains: P - Envelope glycoprotein GP41 protein, length: 7 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.