Sequence Similarity Clusters for the Entities in PDB 1TJG

Entity #1 | Chains: L
FAB 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9256
95 % 2 41 1146
90 % 106 518 3
70 % 365 1639 3
50 % 911 3985 1
40 % 912 3986 1
30 % 994 4715 1
Entity #2 | Chains: H
FAB 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 18278
95 % 2 41 1144
90 % 2 41 1166
70 % 444 1932 1
50 % 912 3985 1
40 % 913 3986 1
30 % 995 4715 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.