Sequence Similarity Clusters for the Entities in PDB 1TJG

Entity #1 | Chains: L
FAB 2F5 Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9357
95 % 2 41 1152
90 % 125 590 3
70 % 371 1653 3
50 % 928 4026 1
40 % 929 4028 1
30 % 1013 4764 1
Entity #2 | Chains: H
FAB 2F5 Heavy Chain protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 18483
95 % 2 41 1150
90 % 2 41 1172
70 % 452 1952 1
50 % 929 4026 1
40 % 930 4028 1
30 % 1014 4764 1
Entity #3 | Chains: P
Envelope glycoprotein GP41 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.