Sequence Similarity Clusters for the Entities in PDB 1TIM

Entity #1 | Chains: A,B
TRIOSEPHOSPHATE ISOMERASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38472
95 % 17 17 1599 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 17 17 1627
70 % 32 32 719
50 % 151 151 122
40 % 195 195 102
30 % 197 197 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.