Sequence Similarity Clusters for the Entities in PDB 1TIM

Entity #1 | Chains: A,B
TRIOSEPHOSPHATE ISOMERASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39300
95 % 17 17 1631 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 17 17 1664
70 % 32 32 731
50 % 151 151 128
40 % 195 195 104
30 % 197 197 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures