Sequence Similarity Clusters for the Entities in PDB 1TIM

Entity #1 | Chains: A,B
TRIOSEPHOSPHATE ISOMERASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37859
95 % 17 17 1574 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 17 17 1600
70 % 32 32 712
50 % 151 151 118
40 % 193 193 101
30 % 195 195 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.