Sequence Similarity Clusters for the Entities in PDB 1THC

Entity #1 | Chains: A,B
TRANSTHYRETIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 1489
95 % 274 295 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 274 295 12
70 % 276 301 15
50 % 280 305 22
40 % 280 305 35
30 % 288 317 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures