Sequence Similarity Clusters for the Entities in PDB 1T6V

Entity #1 | Chains: L,M
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 309 665 3
95 % 333 718 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 339 735 5
70 % 418 955 7
50 % 418 963 8
40 % 421 997 11
30 % 421 997 20
Entity #2 | Chains: N,O
novel antigen receptor protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29766
95 % 2 2 24679 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 23864
70 % 3 6 6401
50 % 5 17 1930
40 % 141 936 5
30 % 154 1065 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures