Sequence Similarity Clusters for the Entities in PDB 1T6V

Entity #1 | Chains: L,M
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 309 668 3
95 % 333 721 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 339 738 5
70 % 419 961 7
50 % 419 969 8
40 % 422 1003 11
30 % 422 1003 20
Entity #2 | Chains: N,O
novel antigen receptor protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30363
95 % 2 2 25145 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 24298
70 % 3 6 6528
50 % 5 17 1983
40 % 143 956 5
30 % 156 1085 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures