Sequence Similarity Clusters for the Entities in PDB 1T6V

Entity #1 | Chains: L,M
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 346 747 3
95 % 357 764 3 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 363 781 5
70 % 444 1005 7
50 % 444 1014 8
40 % 447 1049 10
30 % 447 1049 19
Entity #2 | Chains: N,O
novel antigen receptor protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29789
95 % 2 2 26027 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 2 2 25100
70 % 3 6 6883
50 % 5 17 2078
40 % 48 375 27
30 % 637 7514 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures